None 00_211025_snag-MTF_Master
In [1]:
%%javascript
IPython.OutputArea.prototype._should_scroll = function(lines) {
    return false;
}
In [2]:
# Load libraries
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
import seaborn as sns
import scipy.optimize as opt
from scipy.interpolate import interp1d
import sys
import geopandas as gpd
import geoplot as gplt
from shapely.geometry import Point, Polygon
import shapely.speedups
import warnings
warnings.simplefilter(action='ignore', category=FutureWarning) # ignore Future deprecation warning
warnings.simplefilter(action='ignore', category=RuntimeWarning) # ignore NaNs
from scipy.optimize import OptimizeWarning
warnings.simplefilter("ignore", OptimizeWarning) # This comes from the initial guesses
import logging
logging.basicConfig(level=logging.CRITICAL) # ignore no handles to put in legend warning from matplotlib
shapely.speedups.enable()

sys.path.append('/Users/antje/Update_PIK/')

from classes import boundaries as bd
#from classes import functions as fcy
from classes import snag_MTF_func as sg
from classes import bokeh as bf
from classes import lpjml_tools as lpj

plot_setup = bd.plot_setup()
params = {'mathtext.default':'regular'}
plt.rcParams.update(params)

%matplotlib inline
%config Completer.use_jedi = False 
Loading BokehJS ...
In [3]:
#---------------#
#  Import data  #
#---------------#
data = pd.read_csv('210910_MTF_input.csv')

data.loc[data.site_name.isnull(), ['site_name']] = '' # Necessary for looping !!!
data.loc[data.DBH_mean.isnull(), ['DBH_mean']] = ''
data.loc[data['y.unit'] == 'ntree', ['y.unit']] = 'count'
data.loc[data.DBH_class.isna(), 'DBH_class'] = ''


#--------------------#
#   Transform data   #
#--------------------#
data.loc[data.y > 1, 'y'].y = 1 # correcting digitisation errors
In [4]:
refs_working = ['Russell2006SnagLogging',
                'Angers2011TreeStudy',
                'Vanderwel2006AnTransitions',
                'DeLong2008TemporalColumbia',
                'Onodera2015DoJapan','Grayson2019PersistenceUSA', 
                'Storaunet2002TimeForest',
                'Bond-Lamberty2008DecompositionChronosequence',
                'Moroni2006DisturbanceForests',
                'Chambers2014SnagForests',
                'Conner2005TheTexas',                
                'Dunn2015TemporalUSA',
                'Huggard1999StaticSnags',
                'Rhoades2020SnagfallUSA', 'Cline1980SnagOregon',
                'Lee1998DynamicsForests',
                'Wilson2005DynamicsForest',
                'Lyon1977AttritionMontana',
                'Zarnoch2013SnagForest',
                'Moorman1999SnagPiedmont','Everett1999SnagUSA',
                'Vanderwel2006SnagForests',
                'Bull1983LongevityWoodpeckers',                
                'Ganey2012Trends2007',
                'Landram2002DemographyCalifornia',
                'Parish2010SnagColumbia',
                'Garber2005SnagMaine','Angers2010SnagSpecies','Mitchell1998FallOregon',
                'Molinas-Gonzalez2017FallMountain',
                'Hogg2015FactorsCanada',
                'Aakala2010CoarseDynamics'
               ]
print(len(data.Reference.unique()),len(refs_working))
reference_list = data.Reference.unique().tolist()
reference_list
38 32
Out[4]:
['Russell2006SnagLogging',
 'Cline1980SnagOregon',
 'Everett1999SnagUSA',
 'Mitchell1998FallOregon',
 'Storaunet2002TimeForest',
 'Moorman1999SnagPiedmont',
 'Garber2005SnagMaine',
 'Angers2010SnagSpecies',
 'Aakala2010CoarseDynamics',
 'Angers2011TreeStudy',
 'Bond-Lamberty2008DecompositionChronosequence',
 'Lee1998DynamicsForests',
 'Moroni2006DisturbanceForests',
 'Vanderwel2006AnTransitions',
 'Vanderwel2006SnagForests',
 'Chambers2014SnagForests',
 'Conner2005TheTexas',
 'DeLong2008TemporalColumbia',
 'Dunn2015TemporalUSA',
 'Huggard1999StaticSnags',
 'Molinas-Gonzalez2017FallMountain',
 'Onodera2015DoJapan',
 'Wilson2005DynamicsForest',
 'Bull1983LongevityWoodpeckers',
 'Ganey2012Trends2007',
 'Hogg2015FactorsCanada',
 'Parish2010SnagColumbia',
 'Lyon1977AttritionMontana',
 'Zarnoch2013SnagForest',
 'Grayson2019PersistenceUSA',
 'Landram2002DemographyCalifornia',
 'Dunn2012TemporalCascades',
 'Woolley2019BeyondUSA',
 'Yamasaki2006SnagHardwoods',
 'Sinclair2004PersistenceAustralia',
 'Chambers2005PonderosaArizona',
 'Mäkinen2006PredictingFinland',
 'Ritchie2014EstablishmentForest']
In [5]:
#reference_list = ['Wilson2005DynamicsForest']
for ref in reference_list: 
    sg.derive_MTF(data[data.Reference == ref], ref)
#----------------------------#
#   Russell2006SnagLogging   #
#----------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 1


Calculating MTFcount!


 Ponderosa pine
DBH class:  >23 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
9.893667089829371
removing the old ENTRY count Ponderosa pine

 Douglas fir
DBH class:  >23 cm;  Douglas fir
Logistic regression
removing the old ENTRY count Douglas fir
Weigh to species level True
15.716294695063896
removing the old ENTRY count Douglas fir
MTF_site 13.827491106048795
Russell2006SnagLogging
Star Gulch
removing the old ENTRY
Star Gulch
#-------------------------#
#   Cline1980SnagOregon   #
#-------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 4


Calculating MTFcount!


 Douglas fir
DBH class:  10-18 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  19-31 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  32-47 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  47-72 cm;  Douglas fir
removing the old ENTRY count Douglas fir
Weigh to species level True
15.024681300904541
removing the old ENTRY count Douglas fir
MTF_site 15.024681300904541
Cline1980SnagOregon
Burnt woods, Black Rock, Willamette
removing the old ENTRY
Burnt woods, Black Rock, Willamette
Calculating MTFcmass!


 Douglas fir
DBH class:  10-18 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  19-31 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  32-47 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  47-72 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [11.27702321 19.49509361 29.86821315 35.98883009]
removing the old ENTRY cmass Douglas fir
MTF_site 24.314899643630476
Cline1980SnagOregon
Burnt woods, Black Rock, Willamette
removing the old ENTRY
Burnt woods, Black Rock, Willamette
#------------------------#
#   Everett1999SnagUSA   #
#------------------------#

No. sites: 1
No. species: 5 
No. DBH classes: 3


Calculating MTFcount!


 Douglas fir
DBH class:  3<23 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  23<41 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  41<64 cm;  Douglas fir
removing the old ENTRY count Douglas fir
Weigh to species level True
24.385067930958044
removing the old ENTRY count Douglas fir

 Subalpine fir
DBH class:  3<23 cm;  Subalpine fir
removing the old ENTRY count Subalpine fir
DBH class:  23<41 cm;  Subalpine fir
removing the old ENTRY count Subalpine fir
Weigh to species level True
21.273874865918003
removing the old ENTRY count Subalpine fir

 Lodgepole pine
DBH class:  3<23 cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
DBH class:  23<41 cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
Weigh to species level True
16.95569578534599
removing the old ENTRY count Lodgepole pine

 Ponderosa pine
DBH class:  3<23 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
8.165001957712661
removing the old ENTRY count Ponderosa pine

 Engelmann spruce
DBH class:  23<41 cm;  Engelmann spruce
Logistic regression
removing the old ENTRY count Engelmann spruce
DBH class:  41<64 cm;  Engelmann spruce
Logistic regression
removing the old ENTRY count Engelmann spruce
Weigh to species level True
52.95774533497392
removing the old ENTRY count Engelmann spruce
MTF_site 22.97748209326372
Everett1999SnagUSA

removing the old ENTRY

Calculating MTFcmass!


 Douglas fir
DBH class:  3<23 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  23<41 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  41<64 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [12.26056503 27.13358532 62.69805199]
removing the old ENTRY cmass Douglas fir

 Subalpine fir
DBH class:  3<23 cm;  Subalpine fir
removing the old ENTRY cmass Subalpine fir
DBH class:  23<41 cm;  Subalpine fir
removing the old ENTRY cmass Subalpine fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [19.42853695 29.47537673]
removing the old ENTRY cmass Subalpine fir

 Lodgepole pine
DBH class:  3<23 cm;  Lodgepole pine
removing the old ENTRY cmass Lodgepole pine
DBH class:  23<41 cm;  Lodgepole pine
removing the old ENTRY cmass Lodgepole pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [16.50059702 19.98968758]
removing the old ENTRY cmass Lodgepole pine

 Ponderosa pine
DBH class:  3<23 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [8.16500196]
removing the old ENTRY cmass Ponderosa pine

 Engelmann spruce
DBH class:  23<41 cm;  Engelmann spruce
Logistic regression
removing the old ENTRY cmass Engelmann spruce
DBH class:  41<64 cm;  Engelmann spruce
Logistic regression
removing the old ENTRY cmass Engelmann spruce
Weigh to species level False
Cmass whole multiple MTF_species_dc [37.79994945 68.11554122]
removing the old ENTRY cmass Engelmann spruce
MTF_site 45.96982103826345
Everett1999SnagUSA

removing the old ENTRY

#----------------------------#
#   Mitchell1998FallOregon   #
#----------------------------#

No. sites: 2
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Lodgepole pine
DBH class:   cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
Weigh to species level True
Transfer to site level only. No DBH classes!
6.867043647934568
removing the old ENTRY count Lodgepole pine
6.867043647934568
removing the old ENTRY count Lodgepole pine
MTF_site 6.867043647934568
Mitchell1998FallOregon
thinned
removing the old ENTRY
thinned
 Lodgepole pine
DBH class:   cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
Weigh to species level True
Transfer to site level only. No DBH classes!
9.310268625161081
removing the old ENTRY count Lodgepole pine
9.310268625161081
removing the old ENTRY count Lodgepole pine
MTF_site 9.310268625161081
Mitchell1998FallOregon
unthinned
removing the old ENTRY
unthinned
#-----------------------------#
#   Storaunet2002TimeForest   #
#-----------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Norway spruce
DBH class:  15-65 cm;  Norway spruce
Weigh to species level True
Transfer to site level only. No DBH classes!
19.71025942383703
removing the old ENTRY count Norway spruce
19.71025942383703
removing the old ENTRY count Norway spruce
MTF_site 19.71025942383703
Storaunet2002TimeForest
Ringerike
removing the old ENTRY
Ringerike
#-----------------------------#
#   Moorman1999SnagPiedmont   #
#-----------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 5


Calculating MTFcount!


 Loblolly pine
DBH class:  10.2-15.2 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
DBH class:  15.3-20.3 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
DBH class:  20.4-25.4 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
DBH class:  25.5-30.5 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
DBH class:  >30.5 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
Weigh to species level True
3.130494508444237
removing the old ENTRY count Loblolly pine
MTF_site 3.130494508444237
Moorman1999SnagPiedmont
Clemson University Experimental Forest
removing the old ENTRY
Clemson University Experimental Forest
Calculating MTFcmass!


 Loblolly pine
DBH class:  10.2-15.2 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
DBH class:  15.3-20.3 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
DBH class:  20.4-25.4 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
DBH class:  25.5-30.5 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
DBH class:  >30.5 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [2.97120989 3.32437496 3.11476126 3.15521065 3.23814631]
removing the old ENTRY cmass Loblolly pine
MTF_site 3.1813489029287547
Moorman1999SnagPiedmont
Clemson University Experimental Forest
removing the old ENTRY
Clemson University Experimental Forest
#-------------------------#
#   Garber2005SnagMaine   #
#-------------------------#

No. sites: 1
No. species: 7 
No. DBH classes: 13


Calculating MTFcount!


 Balsam fir
DBH class:  10.3-12.7 cm;  Balsam fir
removing the old ENTRY count Balsam fir
DBH class:  12.8-15.2 cm;  Balsam fir
removing the old ENTRY count Balsam fir
DBH class:  15.3-17.8 cm;  Balsam fir
removing the old ENTRY count Balsam fir
DBH class:  17.9-20.3 cm;  Balsam fir
removing the old ENTRY count Balsam fir
DBH class:  20.4-22.9 cm;  Balsam fir
removing the old ENTRY count Balsam fir
DBH class:  25.5-27.9 cm;  Balsam fir
removing the old ENTRY count Balsam fir
Weigh to species level True
7.431393292781014
removing the old ENTRY count Balsam fir

 Red or black spruce
DBH class:  10.3-12.7 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  12.8-15.2 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  15.3-17.8 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  17.9-20.3 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  20.4-22.9 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  23.0-25.4 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  25.5-27.9 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
DBH class:  28.0-30.5 cm;  Red or black spruce
removing the old ENTRY count Red or black spruce
Weigh to species level True
7.506895546828102
removing the old ENTRY count Red or black spruce

 White spruce
DBH class:  10.3-12.7 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  12.8-15.2 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  15.3-17.8 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  17.9-20.3 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  20.4-22.9 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  23.0-25.4 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  28.0-30.5 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  30.6-33.0 cm;  White spruce
removing the old ENTRY count White spruce
DBH class:  35.7-38.1 cm;  White spruce
removing the old ENTRY count White spruce
Weigh to species level True
7.230770721150394
removing the old ENTRY count White spruce

 Eastern hemlock
DBH class:  10.3-12.7 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  12.8-15.2 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  15.3-17.8 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  17.9-20.3 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  20.4-22.9 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  23.0-25.4 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  25.5-27.9 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  28.0-30.5 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  30.6-33.0 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  35.7-38.1 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  38.2-40.6 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
DBH class:  40.7-43.2 cm;  Eastern hemlock
removing the old ENTRY count Eastern hemlock
Weigh to species level True
11.854600546583194
removing the old ENTRY count Eastern hemlock

 White cedar
DBH class:  10.3-12.7 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  12.8-15.2 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  15.3-17.8 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  17.9-20.3 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  20.4-22.9 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  23.0-25.4 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  30.6-33.0 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  33.1-35.6 cm;  White cedar
removing the old ENTRY count White cedar
DBH class:  35.7-38.1 cm;  White cedar
removing the old ENTRY count White cedar
Weigh to species level True
11.709817110029572
removing the old ENTRY count White cedar

 Red mapple
DBH class:  10.3-12.7 cm;  Red mapple
removing the old ENTRY count Red mapple
DBH class:  12.8-15.2 cm;  Red mapple
removing the old ENTRY count Red mapple
DBH class:  15.3-17.8 cm;  Red mapple
removing the old ENTRY count Red mapple
DBH class:  17.9-20.3 cm;  Red mapple
removing the old ENTRY count Red mapple
DBH class:  20.4-22.9 cm;  Red mapple
removing the old ENTRY count Red mapple
DBH class:  23.0-25.4 cm;  Red mapple
removing the old ENTRY count Red mapple
Weigh to species level True
10.171632306753104
removing the old ENTRY count Red mapple

 Paper birch
DBH class:  10.3-12.7 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  12.8-15.2 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  15.3-17.8 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  17.9-20.3 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  20.4-22.9 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  23.0-25.4 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  25.5-27.9 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  28.0-30.5 cm;  Paper birch
removing the old ENTRY count Paper birch
DBH class:  30.6-33.0 cm;  Paper birch
removing the old ENTRY count Paper birch
Weigh to species level True
8.469518440489576
removing the old ENTRY count Paper birch
MTF_site 9.255258438256208
Garber2005SnagMaine
Penobscot Experimental Forest (PEF)
removing the old ENTRY
Penobscot Experimental Forest (PEF)
Calculating MTFcmass!


 Balsam fir
DBH class:  10.3-12.7 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
DBH class:  12.8-15.2 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
DBH class:  15.3-17.8 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
DBH class:  17.9-20.3 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
DBH class:  20.4-22.9 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
DBH class:  25.5-27.9 cm;  Balsam fir
removing the old ENTRY cmass Balsam fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [7.28124018 7.43681961 7.48876333 7.5537651  7.48874018 7.41285879]
removing the old ENTRY cmass Balsam fir

 Red or black spruce
DBH class:  10.3-12.7 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  12.8-15.2 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  15.3-17.8 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  17.9-20.3 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  20.4-22.9 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  23.0-25.4 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  25.5-27.9 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
DBH class:  28.0-30.5 cm;  Red or black spruce
removing the old ENTRY cmass Red or black spruce
Weigh to species level False
Cmass whole multiple MTF_species_dc [6.95748089 7.51025998 7.43531514 7.5703551  7.52430159 7.61804152
 7.73731247 7.73121683]
removing the old ENTRY cmass Red or black spruce

 White spruce
DBH class:  10.3-12.7 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  12.8-15.2 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  15.3-17.8 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  17.9-20.3 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  20.4-22.9 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  23.0-25.4 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  28.0-30.5 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  30.6-33.0 cm;  White spruce
removing the old ENTRY cmass White spruce
DBH class:  35.7-38.1 cm;  White spruce
removing the old ENTRY cmass White spruce
Weigh to species level False
Cmass whole multiple MTF_species_dc [7.66054037 7.31760339 7.06662089 6.97844345 6.94865917 6.96410832
 7.08413865 7.222054   7.5320238 ]
removing the old ENTRY cmass White spruce

 Eastern hemlock
DBH class:  10.3-12.7 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  12.8-15.2 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  15.3-17.8 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  17.9-20.3 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  20.4-22.9 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  23.0-25.4 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  25.5-27.9 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  28.0-30.5 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  30.6-33.0 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  35.7-38.1 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  38.2-40.6 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
DBH class:  40.7-43.2 cm;  Eastern hemlock
removing the old ENTRY cmass Eastern hemlock
Weigh to species level False
Cmass whole multiple MTF_species_dc [11.56531994 13.07890354 13.27093926 11.9168372  11.97686687 12.06420219
 11.8863734  11.35384857 11.21523534 10.92580277 10.73329919 10.92441856]
removing the old ENTRY cmass Eastern hemlock

 White cedar
DBH class:  10.3-12.7 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  12.8-15.2 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  15.3-17.8 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  17.9-20.3 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  20.4-22.9 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  23.0-25.4 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  30.6-33.0 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  33.1-35.6 cm;  White cedar
removing the old ENTRY cmass White cedar
DBH class:  35.7-38.1 cm;  White cedar
removing the old ENTRY cmass White cedar
Weigh to species level False
Cmass whole multiple MTF_species_dc [10.23782628 11.60282042 11.59213423 11.54792782 11.82455003 11.71369729
 11.98490005 12.28311406 12.59943411]
removing the old ENTRY cmass White cedar

 Red mapple
DBH class:  10.3-12.7 cm;  Red mapple
removing the old ENTRY cmass Red mapple
DBH class:  12.8-15.2 cm;  Red mapple
removing the old ENTRY cmass Red mapple
DBH class:  15.3-17.8 cm;  Red mapple
removing the old ENTRY cmass Red mapple
DBH class:  17.9-20.3 cm;  Red mapple
removing the old ENTRY cmass Red mapple
DBH class:  20.4-22.9 cm;  Red mapple
removing the old ENTRY cmass Red mapple
DBH class:  23.0-25.4 cm;  Red mapple
removing the old ENTRY cmass Red mapple
Weigh to species level False
Cmass whole multiple MTF_species_dc [10.86954871 10.45912491 10.28664805 10.11763537  9.6645146   9.52592752]
removing the old ENTRY cmass Red mapple

 Paper birch
DBH class:  10.3-12.7 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  12.8-15.2 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  15.3-17.8 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  17.9-20.3 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  20.4-22.9 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  23.0-25.4 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  25.5-27.9 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  28.0-30.5 cm;  Paper birch
removing the old ENTRY cmass Paper birch
DBH class:  30.6-33.0 cm;  Paper birch
removing the old ENTRY cmass Paper birch
Weigh to species level False
Cmass whole multiple MTF_species_dc [7.96756739 8.13784673 8.22526682 8.38003155 8.57519469 8.69843146
 8.63239725 8.75908306 8.72918783]
removing the old ENTRY cmass Paper birch
MTF_site 9.338277284388678
Garber2005SnagMaine
Penobscot Experimental Forest (PEF)
removing the old ENTRY
Penobscot Experimental Forest (PEF)
#---------------------------#
#   Angers2010SnagSpecies   #
#---------------------------#

No. sites: 2
No. species: 4 
No. DBH classes: 1


Calculating MTFcount!


 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY count Trembling aspen
Weigh to species level True
14.789576212224743
removing the old ENTRY count Trembling aspen

 Balsam fir
DBH class:   cm;  Balsam fir
removing the old ENTRY count Balsam fir
Weigh to species level True
18.822367861905732
removing the old ENTRY count Balsam fir

 Jack pine
DBH class:   cm;  Jack pine
removing the old ENTRY count Jack pine
Weigh to species level True
25.604146621111223
removing the old ENTRY count Jack pine
MTF_site 19.315107304248123
Angers2010SnagSpecies
Lake Duparquet Research and Teaching Forest
removing the old ENTRY
Lake Duparquet Research and Teaching Forest
 Black spruce
DBH class:   cm;  Black spruce
removing the old ENTRY count Black spruce
Weigh to species level True
18.88100391272653
removing the old ENTRY count Black spruce
MTF_site 18.88100391272653
Angers2010SnagSpecies
Coniferous boreal forest
removing the old ENTRY
Coniferous boreal forest
#------------------------------#
#   Aakala2010CoarseDynamics   #
#------------------------------#

No. sites: 3
No. species: 1 
No. DBH classes: 1


Calculating MTFc!


 Norway spruce
DBH class:   cm;  Norway spruce
Weigh to species level True
Transfer to site level only. No DBH classes!
25.452890941816182
removing the old ENTRY c Norway spruce
25.452890941816182
removing the old ENTRY c Norway spruce
MTF_site 25.452890941816182
Aakala2010CoarseDynamics
Lappland
removing the old ENTRY
Lappland
 Norway spruce
DBH class:   cm;  Norway spruce
Weigh to species level True
Transfer to site level only. No DBH classes!
31.612994865508778
removing the old ENTRY c Norway spruce
31.612994865508778
removing the old ENTRY c Norway spruce
MTF_site 31.612994865508778
Aakala2010CoarseDynamics
Murmansk
removing the old ENTRY
Murmansk
 Norway spruce
DBH class:   cm;  Norway spruce
Weigh to species level True
Transfer to site level only. No DBH classes!
12.729219606108478
removing the old ENTRY c Norway spruce
12.729219606108478
removing the old ENTRY c Norway spruce
MTF_site 12.729219606108478
Aakala2010CoarseDynamics
Arkhangelsk
removing the old ENTRY
Arkhangelsk
#-------------------------#
#   Angers2011TreeStudy   #
#-------------------------#

No. sites: 1
No. species: 3 
No. DBH classes: 1


Calculating MTFcount!


 Trembling aspen
DBH class:   cm;  Trembling aspen
Logistic regression
removing the old ENTRY count Trembling aspen
Weigh to species level True
7.153442741490582
removing the old ENTRY count Trembling aspen

 Jack pine
DBH class:   cm;  Jack pine
Logistic regression
removing the old ENTRY count Jack pine
Weigh to species level True
8.262926401356069
removing the old ENTRY count Jack pine

 Black spruce
DBH class:   cm;  Black spruce
Logistic regression
removing the old ENTRY count Black spruce
Weigh to species level True
5.876990100755984
removing the old ENTRY count Black spruce
MTF_site 6.5308663941557015
Angers2011TreeStudy

removing the old ENTRY

#--------------------------------------------------#
#   Bond-Lamberty2008DecompositionChronosequence   #
#--------------------------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Black spruce
DBH class:   cm;  Black spruce
Weigh to species level True
Transfer to site level only. No DBH classes!
15.12323001820704
removing the old ENTRY count Black spruce
15.12323001820704
removing the old ENTRY count Black spruce
MTF_site 15.12323001820704
Bond-Lamberty2008DecompositionChronosequence

removing the old ENTRY

#----------------------------#
#   Lee1998DynamicsForests   #
#----------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 4


Calculating MTFcount!


 Quaking aspen
DBH class:  10-19 cm;  Quaking aspen
removing the old ENTRY count Quaking aspen
DBH class:  20-29 cm;  Quaking aspen
Logistic regression
removing the old ENTRY count Quaking aspen
DBH class:  30-39 cm;  Quaking aspen
Logistic regression
removing the old ENTRY count Quaking aspen
DBH class:  >40 cm;  Quaking aspen
Logistic regression
removing the old ENTRY count Quaking aspen
Weigh to species level True
18.109805022093532
removing the old ENTRY count Quaking aspen
MTF_site 18.109805022093532
Lee1998DynamicsForests

removing the old ENTRY

Calculating MTFcmass!


 Quaking aspen
DBH class:  10-19 cm;  Quaking aspen
removing the old ENTRY cmass Quaking aspen
DBH class:  20-29 cm;  Quaking aspen
Logistic regression
removing the old ENTRY cmass Quaking aspen
DBH class:  30-39 cm;  Quaking aspen
Logistic regression
removing the old ENTRY cmass Quaking aspen
DBH class:  >40 cm;  Quaking aspen
Logistic regression
removing the old ENTRY cmass Quaking aspen
Weigh to species level False
Cmass whole multiple MTF_species_dc [18.0932801  18.01772452 17.38633894 18.93771025]
removing the old ENTRY cmass Quaking aspen
MTF_site 18.341242745449538
Lee1998DynamicsForests

removing the old ENTRY

#----------------------------------#
#   Moroni2006DisturbanceForests   #
#----------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 White pine
DBH class:   cm;  White pine
Weigh to species level True
Transfer to site level only. No DBH classes!
7.7414766816444915
removing the old ENTRY count White pine
7.7414766816444915
removing the old ENTRY count White pine
MTF_site 7.7414766816444915
Moroni2006DisturbanceForests
SB34
removing the old ENTRY
SB34
#--------------------------------#
#   Vanderwel2006AnTransitions   #
#--------------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 1


Calculating MTFcount!


 White pine
DBH class:   cm;  White pine
Weigh to species level True
20.086448385085767
removing the old ENTRY count White pine

 Red pine
DBH class:   cm;  Red pine
Weigh to species level True
41.307817482366545
removing the old ENTRY count Red pine
MTF_site 22.898918988339844
Vanderwel2006AnTransitions

removing the old ENTRY

#------------------------------#
#   Vanderwel2006SnagForests   #
#------------------------------#

No. sites: 1
No. species: 11 
No. DBH classes: 2


Calculating MTFcount!


 Sugar maple
DBH class:  10 cm;  Sugar maple
removing the old ENTRY count Sugar maple
DBH class:  40 cm;  Sugar maple
removing the old ENTRY count Sugar maple
Weigh to species level True
7.9268960368308745
removing the old ENTRY count Sugar maple

 White birch
DBH class:  10 cm;  White birch
removing the old ENTRY count White birch
DBH class:  40 cm;  White birch
removing the old ENTRY count White birch
Weigh to species level True
9.946843309222485
removing the old ENTRY count White birch

 White ash
DBH class:  10 cm;  White ash
removing the old ENTRY count White ash
DBH class:  40 cm;  White ash
removing the old ENTRY count White ash
Weigh to species level True
7.597376725591749
removing the old ENTRY count White ash

 Ironwood
DBH class:  10 cm;  Ironwood
removing the old ENTRY count Ironwood
DBH class:  40 cm;  Ironwood
removing the old ENTRY count Ironwood
Weigh to species level True
5.473655949659984
removing the old ENTRY count Ironwood

 Yellow birch
DBH class:  10 cm;  Yellow birch
removing the old ENTRY count Yellow birch
DBH class:  40 cm;  Yellow birch
removing the old ENTRY count Yellow birch
Weigh to species level True
9.426624977189753
removing the old ENTRY count Yellow birch

 Red oak
DBH class:  10 cm;  Red oak
removing the old ENTRY count Red oak
DBH class:  40 cm;  Red oak
removing the old ENTRY count Red oak
Weigh to species level True
8.938738611005732
removing the old ENTRY count Red oak

 Black cherry
DBH class:  10 cm;  Black cherry
removing the old ENTRY count Black cherry
DBH class:  40 cm;  Black cherry
removing the old ENTRY count Black cherry
Weigh to species level True
10.234689145545582
removing the old ENTRY count Black cherry

 Basswood
DBH class:  10 cm;  Basswood
removing the old ENTRY count Basswood
DBH class:  40 cm;  Basswood
removing the old ENTRY count Basswood
Weigh to species level True
4.836017848215848
removing the old ENTRY count Basswood

 Red maple
DBH class:  10 cm;  Red maple
removing the old ENTRY count Red maple
DBH class:  40 cm;  Red maple
removing the old ENTRY count Red maple
Weigh to species level True
6.857049000752931
removing the old ENTRY count Red maple

 Trembling aspen
DBH class:  10 cm;  Trembling aspen
removing the old ENTRY count Trembling aspen
DBH class:  40 cm;  Trembling aspen
removing the old ENTRY count Trembling aspen
Weigh to species level True
7.480496043202012
removing the old ENTRY count Trembling aspen

 American beech
DBH class:  10 cm;  American beech
removing the old ENTRY count American beech
DBH class:  40 cm;  American beech
removing the old ENTRY count American beech
Weigh to species level True
7.797613947636189
removing the old ENTRY count American beech
MTF_site 8.007011828479676
Vanderwel2006SnagForests
Ontario Ministry of Natural Resources - PSP
removing the old ENTRY
Ontario Ministry of Natural Resources - PSP
Calculating MTFcmass!


 Sugar maple
DBH class:  10 cm;  Sugar maple
removing the old ENTRY cmass Sugar maple
DBH class:  40 cm;  Sugar maple
removing the old ENTRY cmass Sugar maple
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 6.97065837 11.264353  ]
removing the old ENTRY cmass Sugar maple

 White birch
DBH class:  10 cm;  White birch
removing the old ENTRY cmass White birch
DBH class:  40 cm;  White birch
removing the old ENTRY cmass White birch
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.26760464 15.86068384]
removing the old ENTRY cmass White birch

 White ash
DBH class:  10 cm;  White ash
removing the old ENTRY cmass White ash
DBH class:  40 cm;  White ash
removing the old ENTRY cmass White ash
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 6.75181167 10.5568544 ]
removing the old ENTRY cmass White ash

 Ironwood
DBH class:  10 cm;  Ironwood
removing the old ENTRY cmass Ironwood
DBH class:  40 cm;  Ironwood
removing the old ENTRY cmass Ironwood
Weigh to species level False
Cmass whole multiple MTF_species_dc [5.11569567 6.70094834]
removing the old ENTRY cmass Ironwood

 Yellow birch
DBH class:  10 cm;  Yellow birch
removing the old ENTRY cmass Yellow birch
DBH class:  40 cm;  Yellow birch
removing the old ENTRY cmass Yellow birch
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.90785198 14.62242733]
removing the old ENTRY cmass Yellow birch

 Red oak
DBH class:  10 cm;  Red oak
removing the old ENTRY cmass Red oak
DBH class:  40 cm;  Red oak
removing the old ENTRY cmass Red oak
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.61930071 13.4967968 ]
removing the old ENTRY cmass Red oak

 Black cherry
DBH class:  10 cm;  Black cherry
removing the old ENTRY cmass Black cherry
DBH class:  40 cm;  Black cherry
removing the old ENTRY cmass Black cherry
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.36699266 16.51694096]
removing the old ENTRY cmass Black cherry

 Basswood
DBH class:  10 cm;  Basswood
removing the old ENTRY cmass Basswood
DBH class:  40 cm;  Basswood
removing the old ENTRY cmass Basswood
Weigh to species level False
Cmass whole multiple MTF_species_dc [4.57718595 5.69879086]
removing the old ENTRY cmass Basswood

 Red maple
DBH class:  10 cm;  Red maple
removing the old ENTRY cmass Red maple
DBH class:  40 cm;  Red maple
removing the old ENTRY cmass Red maple
Weigh to species level False
Cmass whole multiple MTF_species_dc [6.21045448 9.03195786]
removing the old ENTRY cmass Red maple

 Trembling aspen
DBH class:  10 cm;  Trembling aspen
removing the old ENTRY cmass Trembling aspen
DBH class:  40 cm;  Trembling aspen
removing the old ENTRY cmass Trembling aspen
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 6.65890779 10.27389609]
removing the old ENTRY cmass Trembling aspen

 American beech
DBH class:  10 cm;  American beech
removing the old ENTRY cmass American beech
DBH class:  40 cm;  American beech
removing the old ENTRY cmass American beech
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 6.85865439 10.90340326]
removing the old ENTRY cmass American beech
MTF_site 11.01763582135013
Vanderwel2006SnagForests
Ontario Ministry of Natural Resources - PSP
removing the old ENTRY
Ontario Ministry of Natural Resources - PSP
#-----------------------------#
#   Chambers2014SnagForests   #
#-----------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Ponderosa pine
DBH class:  10-104.5 cm;  Ponderosa pine
Weigh to species level True
Transfer to site level only. No DBH classes!
5.258546797667366
removing the old ENTRY count Ponderosa pine
5.258546797667366
removing the old ENTRY count Ponderosa pine
MTF_site 5.258546797667366
Chambers2014SnagForests

removing the old ENTRY

#------------------------#
#   Conner2005TheTexas   #
#------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 longleaf and loblolly-shortleaf pine
DBH class:  >38 cm;  longleaf and loblolly-shortleaf pine
Weigh to species level True
Transfer to site level only. No DBH classes!
6.6500274999733815
removing the old ENTRY count longleaf and loblolly-shortleaf pine
6.6500274999733815
removing the old ENTRY count longleaf and loblolly-shortleaf pine
MTF_site 6.6500274999733815
Conner2005TheTexas

removing the old ENTRY

#--------------------------------#
#   DeLong2008TemporalColumbia   #
#--------------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 1


Calculating MTFcount!


 Hybrid white spruce
DBH class:   cm;  Hybrid white spruce
removing the old ENTRY count Hybrid white spruce
Weigh to species level True
20.15839746974018
removing the old ENTRY count Hybrid white spruce

 Subalpine fir
DBH class:   cm;  Subalpine fir
removing the old ENTRY count Subalpine fir
Weigh to species level True
31.843058582835063
removing the old ENTRY count Subalpine fir
MTF_site 28.31048661841103
DeLong2008TemporalColumbia

removing the old ENTRY

#-------------------------#
#   Dunn2015TemporalUSA   #
#-------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFc!


 Grand or white fir
DBH class:   cm;  Grand or white fir
Weigh to species level True
Transfer to site level only. No DBH classes!
8.556903617011878
removing the old ENTRY c Grand or white fir
8.556903617011878
removing the old ENTRY c Grand or white fir
MTF_site 8.556903617011878
Dunn2015TemporalUSA

removing the old ENTRY

#----------------------------#
#   Huggard1999StaticSnags   #
#----------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Subalpine fir
DBH class:   cm;  Subalpine fir
Logistic regression
Weigh to species level True
Transfer to site level only. No DBH classes!
49.2506656641613
removing the old ENTRY count Subalpine fir
49.2506656641613
removing the old ENTRY count Subalpine fir
MTF_site 49.2506656641613
Huggard1999StaticSnags

removing the old ENTRY

#--------------------------------------#
#   Molinas-Gonzalez2017FallMountain   #
#--------------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Pine
DBH class:   cm;  Pine
Weigh to species level True
Transfer to site level only. No DBH classes!
2.595341585077325
removing the old ENTRY count Pine
2.595341585077325
removing the old ENTRY count Pine
MTF_site 2.595341585077325
Molinas-Gonzalez2017FallMountain

removing the old ENTRY

#------------------------#
#   Onodera2015DoJapan   #
#------------------------#

No. sites: 1
No. species: 7 
No. DBH classes: 1


Calculating MTFcount!


 Sakhalin fir
DBH class:   cm;  Sakhalin fir
removing the old ENTRY count Sakhalin fir
Weigh to species level True
14.450884866404257
removing the old ENTRY count Sakhalin fir

 Spruce
DBH class:   cm;  Spruce
removing the old ENTRY count Spruce
Weigh to species level True
12.098068426318264
removing the old ENTRY count Spruce

 Mizunara
DBH class:   cm;  Mizunara
removing the old ENTRY count Mizunara
Weigh to species level True
14.891717003103643
removing the old ENTRY count Mizunara

 Amur cork tree
DBH class:   cm;  Amur cork tree
removing the old ENTRY count Amur cork tree
Weigh to species level True
8.536247727121605
removing the old ENTRY count Amur cork tree

 Yellow-paint maple
DBH class:   cm;  Yellow-paint maple
removing the old ENTRY count Yellow-paint maple
Weigh to species level True
4.110595017389487
removing the old ENTRY count Yellow-paint maple

 Japanese linden
DBH class:   cm;  Japanese linden
removing the old ENTRY count Japanese linden
Weigh to species level True
8.369065790981269
removing the old ENTRY count Japanese linden

 Other Hardwoods
DBH class:   cm;  Other Hardwoods
removing the old ENTRY count Other Hardwoods
Weigh to species level True
8.793925613684177
removing the old ENTRY count Other Hardwoods
MTF_site 11.224585013426369
Onodera2015DoJapan

removing the old ENTRY

#------------------------------#
#   Wilson2005DynamicsForest   #
#------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 4


Calculating MTFcount!


 Oaks
DBH class:  <10 cm;  Oaks
removing the old ENTRY count Oaks
DBH class:  10-20 cm;  Oaks
Logistic regression
removing the old ENTRY count Oaks
DBH class:  20-30 cm;  Oaks
Logistic regression
removing the old ENTRY count Oaks
DBH class:  30-50 cm;  Oaks
Logistic regression
removing the old ENTRY count Oaks
Weigh to species level True
10.228542946575297
removing the old ENTRY count Oaks
MTF_site 10.228542946575297
Wilson2005DynamicsForest
Cadwell Memorial Forest
removing the old ENTRY
Cadwell Memorial Forest
Calculating MTFcmass!


 Oaks
DBH class:  <10 cm;  Oaks
removing the old ENTRY cmass Oaks
DBH class:  10-20 cm;  Oaks
Logistic regression
removing the old ENTRY cmass Oaks
DBH class:  20-30 cm;  Oaks
Logistic regression
removing the old ENTRY cmass Oaks
DBH class:  30-50 cm;  Oaks
Logistic regression
removing the old ENTRY cmass Oaks
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.21149675 11.20678082 17.09579658 15.18129595]
removing the old ENTRY cmass Oaks
MTF_site 13.321936782235335
Wilson2005DynamicsForest
Cadwell Memorial Forest
removing the old ENTRY
Cadwell Memorial Forest
#----------------------------------#
#   Bull1983LongevityWoodpeckers   #
#----------------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 3


Calculating MTFcount!


 Ponderosa pine
DBH class:  <25 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY count Ponderosa pine
DBH class:  25-49 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY count Ponderosa pine
DBH class:  >50 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY count Ponderosa pine
Weigh to species level True
7.42057074354461
removing the old ENTRY count Ponderosa pine

 Lodgepole pine
DBH class:  <25 cm;  Lodgepole pine
Logistic regression
removing the old ENTRY count Lodgepole pine
DBH class:  25-49 cm;  Lodgepole pine
Logistic regression
removing the old ENTRY count Lodgepole pine
Weigh to species level True
6.856465370426227
removing the old ENTRY count Lodgepole pine
MTF_site 7.301056893307665
Bull1983LongevityWoodpeckers
Starkey Experimental Forest
removing the old ENTRY
Starkey Experimental Forest
Calculating MTFcmass!


 Ponderosa pine
DBH class:  <25 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY cmass Ponderosa pine
DBH class:  25-49 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY cmass Ponderosa pine
DBH class:  >50 cm;  Ponderosa pine
Logistic regression
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [6.97283854 8.37054752 8.54002068]
removing the old ENTRY cmass Ponderosa pine

 Lodgepole pine
DBH class:  <25 cm;  Lodgepole pine
Logistic regression
removing the old ENTRY cmass Lodgepole pine
DBH class:  25-49 cm;  Lodgepole pine
Logistic regression
removing the old ENTRY cmass Lodgepole pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [6.49309926 7.649637  ]
removing the old ENTRY cmass Lodgepole pine
MTF_site 8.007077228112996
Bull1983LongevityWoodpeckers
Starkey Experimental Forest
removing the old ENTRY
Starkey Experimental Forest
#-------------------------#
#   Ganey2012Trends2007   #
#-------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 6


Calculating MTFcount!


 Ponderosa pine
DBH class:  20-29 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  30-39 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  40-49 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  50-59 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  60-69 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  69> cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
7.840487248483736
removing the old ENTRY count Ponderosa pine

 Mixed conifer
DBH class:  20-29 cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
DBH class:  30-39 cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
DBH class:  40-49 cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
DBH class:  50-59 cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
DBH class:  60-69 cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
DBH class:  69> cm;  Mixed conifer
removing the old ENTRY count Mixed conifer
Weigh to species level True
17.177733203130725
removing the old ENTRY count Mixed conifer
MTF_site 15.386545664130152
Ganey2012Trends2007

removing the old ENTRY

Calculating MTFcmass!


 Ponderosa pine
DBH class:  20-29 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  30-39 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  40-49 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  50-59 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  60-69 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  69> cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [6.61764181 9.84781947 8.03506271 7.96591531 8.29579354 7.23369231]
removing the old ENTRY cmass Ponderosa pine

 Mixed conifer
DBH class:  20-29 cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
DBH class:  30-39 cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
DBH class:  40-49 cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
DBH class:  50-59 cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
DBH class:  60-69 cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
DBH class:  69> cm;  Mixed conifer
removing the old ENTRY cmass Mixed conifer
Weigh to species level False
Cmass whole multiple MTF_species_dc [14.7095126  16.11690873 21.89846015 19.94365205 23.52844386 21.47148614]
removing the old ENTRY cmass Mixed conifer
MTF_site 17.664286444311887
Ganey2012Trends2007

removing the old ENTRY

#---------------------------#
#   Hogg2015FactorsCanada   #
#---------------------------#

No. sites: 24
No. species: 1 
No. DBH classes: 1


Calculating MTFc!


 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
6.312858227196059
removing the old ENTRY c Trembling aspen
6.312858227196059
removing the old ENTRY c Trembling aspen
MTF_site 6.312858227196059
Hogg2015FactorsCanada
ALD
removing the old ENTRY
ALD
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
3.5033484709217886
removing the old ENTRY c Trembling aspen
3.5033484709217886
removing the old ENTRY c Trembling aspen
MTF_site 3.5033484709217886
Hogg2015FactorsCanada
BAT
removing the old ENTRY
BAT
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.580234742428262
removing the old ENTRY c Trembling aspen
5.580234742428262
removing the old ENTRY c Trembling aspen
MTF_site 5.580234742428262
Hogg2015FactorsCanada
BERMS
removing the old ENTRY
BERMS
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.183462666769039
removing the old ENTRY c Trembling aspen
5.183462666769039
removing the old ENTRY c Trembling aspen
MTF_site 5.183462666769039
Hogg2015FactorsCanada
BIG
removing the old ENTRY
BIG
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
8.235079679091026
removing the old ENTRY c Trembling aspen
8.235079679091026
removing the old ENTRY c Trembling aspen
MTF_site 8.235079679091026
Hogg2015FactorsCanada
CAL
removing the old ENTRY
CAL
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.201638278889951
removing the old ENTRY c Trembling aspen
5.201638278889951
removing the old ENTRY c Trembling aspen
MTF_site 5.201638278889951
Hogg2015FactorsCanada
DUN
removing the old ENTRY
DUN
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
7.245388145071075
removing the old ENTRY c Trembling aspen
7.245388145071075
removing the old ENTRY c Trembling aspen
MTF_site 7.245388145071075
Hogg2015FactorsCanada
DVG
removing the old ENTRY
DVG
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.276008119077142
removing the old ENTRY c Trembling aspen
5.276008119077142
removing the old ENTRY c Trembling aspen
MTF_site 5.276008119077142
Hogg2015FactorsCanada
EDG
removing the old ENTRY
EDG
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
15.231380854473796
removing the old ENTRY c Trembling aspen
15.231380854473796
removing the old ENTRY c Trembling aspen
MTF_site 15.231380854473796
Hogg2015FactorsCanada
FTN
removing the old ENTRY
FTN
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
4.944748416709821
removing the old ENTRY c Trembling aspen
4.944748416709821
removing the old ENTRY c Trembling aspen
MTF_site 4.944748416709821
Hogg2015FactorsCanada
GLA
removing the old ENTRY
GLA
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
6.312858227196059
removing the old ENTRY c Trembling aspen
6.312858227196059
removing the old ENTRY c Trembling aspen
MTF_site 6.312858227196059
Hogg2015FactorsCanada
HIG
removing the old ENTRY
HIG
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
3.142119927072013
removing the old ENTRY c Trembling aspen
3.142119927072013
removing the old ENTRY c Trembling aspen
MTF_site 3.142119927072013
Hogg2015FactorsCanada
MIN
removing the old ENTRY
MIN
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
6.6236077911170375
removing the old ENTRY c Trembling aspen
6.6236077911170375
removing the old ENTRY c Trembling aspen
MTF_site 6.6236077911170375
Hogg2015FactorsCanada
MOO
removing the old ENTRY
MOO
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
4.7757185345137
removing the old ENTRY c Trembling aspen
4.7757185345137
removing the old ENTRY c Trembling aspen
MTF_site 4.7757185345137
Hogg2015FactorsCanada
MOR
removing the old ENTRY
MOR
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
6.170093354530603
removing the old ENTRY c Trembling aspen
6.170093354530603
removing the old ENTRY c Trembling aspen
MTF_site 6.170093354530603
Hogg2015FactorsCanada
NOT
removing the old ENTRY
NOT
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.624147283606978
removing the old ENTRY c Trembling aspen
5.624147283606978
removing the old ENTRY c Trembling aspen
MTF_site 5.624147283606978
Hogg2015FactorsCanada
PAS
removing the old ENTRY
PAS
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.931743246970698
removing the old ENTRY c Trembling aspen
5.931743246970698
removing the old ENTRY c Trembling aspen
MTF_site 5.931743246970698
Hogg2015FactorsCanada
PET
removing the old ENTRY
PET
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
8.127416343768115
removing the old ENTRY c Trembling aspen
8.127416343768115
removing the old ENTRY c Trembling aspen
MTF_site 8.127416343768115
Hogg2015FactorsCanada
POP
removing the old ENTRY
POP
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
2.6292652992772183
removing the old ENTRY c Trembling aspen
2.6292652992772183
removing the old ENTRY c Trembling aspen
MTF_site 2.6292652992772183
Hogg2015FactorsCanada
POR
removing the old ENTRY
POR
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
7.543588282248064
removing the old ENTRY c Trembling aspen
7.543588282248064
removing the old ENTRY c Trembling aspen
MTF_site 7.543588282248064
Hogg2015FactorsCanada
RED
removing the old ENTRY
RED
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
5.201638278889951
removing the old ENTRY c Trembling aspen
5.201638278889951
removing the old ENTRY c Trembling aspen
MTF_site 5.201638278889951
Hogg2015FactorsCanada
TAT
removing the old ENTRY
TAT
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
4.912878573299357
removing the old ENTRY c Trembling aspen
4.912878573299357
removing the old ENTRY c Trembling aspen
MTF_site 4.912878573299357
Hogg2015FactorsCanada
TOB
removing the old ENTRY
TOB
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
6.863893684570793
removing the old ENTRY c Trembling aspen
6.863893684570793
removing the old ENTRY c Trembling aspen
MTF_site 6.863893684570793
Hogg2015FactorsCanada
YPT
removing the old ENTRY
YPT
 Trembling aspen
DBH class:   cm;  Trembling aspen
removing the old ENTRY c Trembling aspen
Weigh to species level True
Transfer to site level only. No DBH classes!
7.6803295548131
removing the old ENTRY c Trembling aspen
7.6803295548131
removing the old ENTRY c Trembling aspen
MTF_site 7.6803295548131
Hogg2015FactorsCanada
YRK
removing the old ENTRY
YRK
#----------------------------#
#   Parish2010SnagColumbia   #
#----------------------------#

No. sites: 1
No. species: 3 
No. DBH classes: 6


Calculating MTFcount!


 Western hemlock
DBH class:  <10 cm;  Western hemlock
removing the old ENTRY count Western hemlock
DBH class:  10<20 cm;  Western hemlock
removing the old ENTRY count Western hemlock
DBH class:  20<30 cm;  Western hemlock
removing the old ENTRY count Western hemlock
DBH class:  30<40 cm;  Western hemlock
removing the old ENTRY count Western hemlock
DBH class:  40<50 cm;  Western hemlock
removing the old ENTRY count Western hemlock
DBH class:  >50 cm;  Western hemlock
removing the old ENTRY count Western hemlock
Weigh to species level True
12.34601532545325
removing the old ENTRY count Western hemlock

 Douglas fir
DBH class:  <10 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  10<20 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  20<30 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  30<40 cm;  Douglas fir
Logistic regression
removing the old ENTRY count Douglas fir
DBH class:  40<50 cm;  Douglas fir
Logistic regression
removing the old ENTRY count Douglas fir
DBH class:  >50 cm;  Douglas fir
Logistic regression
removing the old ENTRY count Douglas fir
Weigh to species level True
18.66100346193229
removing the old ENTRY count Douglas fir

 Western redcedar
DBH class:  <10 cm;  Western redcedar
removing the old ENTRY count Western redcedar
DBH class:  10<20 cm;  Western redcedar
removing the old ENTRY count Western redcedar
DBH class:  20<30 cm;  Western redcedar
removing the old ENTRY count Western redcedar
Weigh to species level True
6.140864480640924
removing the old ENTRY count Western redcedar
MTF_site 14.83867957074527
Parish2010SnagColumbia

removing the old ENTRY

Calculating MTFcmass!


 Western hemlock
DBH class:  <10 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
DBH class:  10<20 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
DBH class:  20<30 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
DBH class:  30<40 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
DBH class:  40<50 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
DBH class:  >50 cm;  Western hemlock
removing the old ENTRY cmass Western hemlock
Weigh to species level False
Cmass whole multiple MTF_species_dc [11.72525003 12.7645885  14.55725762 19.31905449 16.63757185 23.26577822]
removing the old ENTRY cmass Western hemlock

 Douglas fir
DBH class:  <10 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  10<20 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  20<30 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  30<40 cm;  Douglas fir
Logistic regression
removing the old ENTRY cmass Douglas fir
DBH class:  40<50 cm;  Douglas fir
Logistic regression
removing the old ENTRY cmass Douglas fir
DBH class:  >50 cm;  Douglas fir
Logistic regression
removing the old ENTRY cmass Douglas fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [14.62897838 18.39096805 26.23769051 39.56507096 58.42160861 77.56802194]
removing the old ENTRY cmass Douglas fir

 Western redcedar
DBH class:  <10 cm;  Western redcedar
removing the old ENTRY cmass Western redcedar
DBH class:  10<20 cm;  Western redcedar
removing the old ENTRY cmass Western redcedar
DBH class:  20<30 cm;  Western redcedar
removing the old ENTRY cmass Western redcedar
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 5.44632207  8.11025988 13.96673362]
removing the old ENTRY cmass Western redcedar
MTF_site 21.983354611161115
Parish2010SnagColumbia

removing the old ENTRY

#------------------------------#
#   Lyon1977AttritionMontana   #
#------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 4


Calculating MTFcount!


 Lodgehole pine
DBH class:  <7.6 cm;  Lodgehole pine
removing the old ENTRY count Lodgehole pine
DBH class:  7.6-20.2 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY count Lodgehole pine
DBH class:  20.3-30 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY count Lodgehole pine
DBH class:  >=30 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY count Lodgehole pine
Weigh to species level True
6.773226054924042
removing the old ENTRY count Lodgehole pine
MTF_site 6.773226054924042
Lyon1977AttritionMontana
Bitterroot National Forest; Sleeping Child Burn
removing the old ENTRY
Bitterroot National Forest; Sleeping Child Burn
Calculating MTFcmass!


 Lodgehole pine
DBH class:  <7.6 cm;  Lodgehole pine
removing the old ENTRY cmass Lodgehole pine
DBH class:  7.6-20.2 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY cmass Lodgehole pine
DBH class:  20.3-30 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY cmass Lodgehole pine
DBH class:  >=30 cm;  Lodgehole pine
Logistic regression
removing the old ENTRY cmass Lodgehole pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 4.07960279 10.10893154  9.21441565 11.04329469]
removing the old ENTRY cmass Lodgehole pine
MTF_site 9.595017622296
Lyon1977AttritionMontana
Bitterroot National Forest; Sleeping Child Burn
removing the old ENTRY
Bitterroot National Forest; Sleeping Child Burn
#---------------------------#
#   Zarnoch2013SnagForest   #
#---------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 2


Calculating MTFcount!


 Loblolly pine
DBH class:  10-22.9 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
DBH class:  23-42.5 cm;  Loblolly pine
removing the old ENTRY count Loblolly pine
Weigh to species level True
2.727711509389671
removing the old ENTRY count Loblolly pine
MTF_site 2.727711509389671
Zarnoch2013SnagForest
Savannah River Site
removing the old ENTRY
Savannah River Site
Calculating MTFcmass!


 Loblolly pine
DBH class:  10-22.9 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
DBH class:  23-42.5 cm;  Loblolly pine
removing the old ENTRY cmass Loblolly pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [2.1407313  4.19516203]
removing the old ENTRY cmass Loblolly pine
MTF_site 3.703073167878343
Zarnoch2013SnagForest
Savannah River Site
removing the old ENTRY
Savannah River Site
#-------------------------------#
#   Grayson2019PersistenceUSA   #
#-------------------------------#

No. sites: 1
No. species: 4 
No. DBH classes: 3


Calculating MTFcount!


 Incense cedar
DBH class:  25-50 cm;  Incense cedar
removing the old ENTRY count Incense cedar
DBH class:  51-76 cm;  Incense cedar
removing the old ENTRY count Incense cedar
DBH class:  ≥77 cm;  Incense cedar
removing the old ENTRY count Incense cedar
Weigh to species level True
11.61386498060362
removing the old ENTRY count Incense cedar

 Sugar pine
DBH class:  25-50 cm;  Sugar pine
removing the old ENTRY count Sugar pine
DBH class:  51-76 cm;  Sugar pine
removing the old ENTRY count Sugar pine
DBH class:  ≥77 cm;  Sugar pine
removing the old ENTRY count Sugar pine
Weigh to species level True
12.920651091793223
removing the old ENTRY count Sugar pine

 White fir
DBH class:  25-50 cm;  White fir
removing the old ENTRY count White fir
DBH class:  51-76 cm;  White fir
removing the old ENTRY count White fir
DBH class:  ≥77 cm;  White fir
removing the old ENTRY count White fir
Weigh to species level True
9.387272055993343
removing the old ENTRY count White fir

 Yellow pine
DBH class:  25-50 cm;  Yellow pine
removing the old ENTRY count Yellow pine
DBH class:  51-76 cm;  Yellow pine
removing the old ENTRY count Yellow pine
DBH class:  ≥77 cm;  Yellow pine
removing the old ENTRY count Yellow pine
Weigh to species level True
7.555973788638542
removing the old ENTRY count Yellow pine
MTF_site 9.270146888684522
Grayson2019PersistenceUSA

removing the old ENTRY

Calculating MTFcmass!


 Incense cedar
DBH class:  25-50 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
DBH class:  51-76 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
DBH class:  ≥77 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
Weigh to species level False
Cmass whole multiple MTF_species_dc [11.38950666 11.41343759 13.27194187]
removing the old ENTRY cmass Incense cedar

 Sugar pine
DBH class:  25-50 cm;  Sugar pine
removing the old ENTRY cmass Sugar pine
DBH class:  51-76 cm;  Sugar pine
removing the old ENTRY cmass Sugar pine
DBH class:  ≥77 cm;  Sugar pine
removing the old ENTRY cmass Sugar pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.96548537 11.58044067 20.73616594]
removing the old ENTRY cmass Sugar pine

 White fir
DBH class:  25-50 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  51-76 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  ≥77 cm;  White fir
removing the old ENTRY cmass White fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.65309943  9.89540238 12.80219964]
removing the old ENTRY cmass White fir

 Yellow pine
DBH class:  25-50 cm;  Yellow pine
removing the old ENTRY cmass Yellow pine
DBH class:  51-76 cm;  Yellow pine
removing the old ENTRY cmass Yellow pine
DBH class:  ≥77 cm;  Yellow pine
removing the old ENTRY cmass Yellow pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 6.99653752  7.49749546 10.09692805]
removing the old ENTRY cmass Yellow pine
MTF_site 10.794992801414608
Grayson2019PersistenceUSA

removing the old ENTRY

#-------------------------------------#
#   Landram2002DemographyCalifornia   #
#-------------------------------------#

No. sites: 1
No. species: 3 
No. DBH classes: 3


Calculating MTFcount!


 Jeffrey pine
DBH class:  13-36 cm;  Jeffrey pine
removing the old ENTRY count Jeffrey pine
DBH class:  38-74  cm;  Jeffrey pine
removing the old ENTRY count Jeffrey pine
DBH class:  >76 cm;  Jeffrey pine
removing the old ENTRY count Jeffrey pine
Weigh to species level True
16.113030258702814
removing the old ENTRY count Jeffrey pine

 Ponderosa pine
DBH class:  13-36 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  38-74  cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  >76 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
16.28003376221635
removing the old ENTRY count Ponderosa pine

 White fir
DBH class:  13-36 cm;  White fir
removing the old ENTRY count White fir
DBH class:  38-74  cm;  White fir
removing the old ENTRY count White fir
DBH class:  >76 cm;  White fir
removing the old ENTRY count White fir
Weigh to species level True
26.25096888613796
removing the old ENTRY count White fir
MTF_site 18.3284014595213
Landram2002DemographyCalifornia

removing the old ENTRY

Calculating MTFcmass!


 Jeffrey pine
DBH class:  13-36 cm;  Jeffrey pine
removing the old ENTRY cmass Jeffrey pine
DBH class:  38-74  cm;  Jeffrey pine
removing the old ENTRY cmass Jeffrey pine
DBH class:  >76 cm;  Jeffrey pine
removing the old ENTRY cmass Jeffrey pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [10.35932587 17.18126926 31.30679559]
removing the old ENTRY cmass Jeffrey pine

 Ponderosa pine
DBH class:  13-36 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  38-74  cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  >76 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.35291979 20.71264912 22.22608911]
removing the old ENTRY cmass Ponderosa pine

 White fir
DBH class:  13-36 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  38-74  cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  >76 cm;  White fir
removing the old ENTRY cmass White fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [20.25201979 34.82836803 31.30679559]
removing the old ENTRY cmass White fir
MTF_site 24.550257502097182
Landram2002DemographyCalifornia

removing the old ENTRY

#------------------------------#
#   Dunn2012TemporalCascades   #
#------------------------------#

No. sites: 1
No. species: 4 
No. DBH classes: 3


Calculating MTFcount!


 True fir
DBH class:  <23 cm;  True fir
removing the old ENTRY count True fir
DBH class:  23-41 cm;  True fir
removing the old ENTRY count True fir
DBH class:  >41 cm;  True fir
removing the old ENTRY count True fir
Weigh to species level True
11.15177976736734
removing the old ENTRY count True fir

 Ponderosa pine
DBH class:  <23 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  23-41 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  >41 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
11.791294352497815
removing the old ENTRY count Ponderosa pine

 Douglas fir
DBH class:  <23 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  23-41 cm;  Douglas fir
removing the old ENTRY count Douglas fir
DBH class:  >41 cm;  Douglas fir
removing the old ENTRY count Douglas fir
Weigh to species level True
13.284404272696602
removing the old ENTRY count Douglas fir

 Lodgepole pine
DBH class:  <23 cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
DBH class:  23-41 cm;  Lodgepole pine
removing the old ENTRY count Lodgepole pine
Weigh to species level True
7.555532279242617
removing the old ENTRY count Lodgepole pine
MTF_site 11.491109551301683
Dunn2012TemporalCascades

removing the old ENTRY

Calculating MTFcmass!


 True fir
DBH class:  <23 cm;  True fir
removing the old ENTRY cmass True fir
DBH class:  23-41 cm;  True fir
removing the old ENTRY cmass True fir
DBH class:  >41 cm;  True fir
removing the old ENTRY cmass True fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 9.83709269 15.11754393 19.77507624]
removing the old ENTRY cmass True fir

 Ponderosa pine
DBH class:  <23 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  23-41 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  >41 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.53066007 12.48755238 16.75773607]
removing the old ENTRY cmass Ponderosa pine

 Douglas fir
DBH class:  <23 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  23-41 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
DBH class:  >41 cm;  Douglas fir
removing the old ENTRY cmass Douglas fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [11.44102782 16.83331883 21.92573632]
removing the old ENTRY cmass Douglas fir

 Lodgepole pine
DBH class:  <23 cm;  Lodgepole pine
removing the old ENTRY cmass Lodgepole pine
DBH class:  23-41 cm;  Lodgepole pine
removing the old ENTRY cmass Lodgepole pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.07668757 11.79672825]
removing the old ENTRY cmass Lodgepole pine
MTF_site 17.88917206392717
Dunn2012TemporalCascades

removing the old ENTRY

#--------------------------#
#   Woolley2019BeyondUSA   #
#--------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 1


Calculating MTFcount!


 Lodgepole pine
DBH class:   cm;  Lodgepole pine
Weigh to species level True
Transfer to site level only. No DBH classes!
16.527936838000183
removing the old ENTRY count Lodgepole pine
16.527936838000183
removing the old ENTRY count Lodgepole pine
MTF_site 16.527936838000183
Woolley2019BeyondUSA
Deschutes and Fremont-Winema national forests
removing the old ENTRY
Deschutes and Fremont-Winema national forests
#-------------------------------#
#   Yamasaki2006SnagHardwoods   #
#-------------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 2


Calculating MTFcount!


 North American beech
DBH class:  11.43-26.416 cm;  North American beech
removing the old ENTRY count North American beech
DBH class:  >26.67 cm;  North American beech
removing the old ENTRY count North American beech
Weigh to species level True
9.31938581000206
removing the old ENTRY count North American beech

 Red maple
DBH class:  11.43-26.416 cm;  Red maple
removing the old ENTRY count Red maple
DBH class:  >26.67 cm;  Red maple
removing the old ENTRY count Red maple
Weigh to species level True
10.536925052425111
removing the old ENTRY count Red maple
MTF_site 9.70531338173125
Yamasaki2006SnagHardwoods
Bartlett Experimental Forest
removing the old ENTRY
Bartlett Experimental Forest
Calculating MTFcmass!


 North American beech
DBH class:  11.43-26.416 cm;  North American beech
removing the old ENTRY cmass North American beech
DBH class:  >26.67 cm;  North American beech
removing the old ENTRY cmass North American beech
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 8.46554019 13.74673346]
removing the old ENTRY cmass North American beech

 Red maple
DBH class:  11.43-26.416 cm;  Red maple
removing the old ENTRY cmass Red maple
DBH class:  >26.67 cm;  Red maple
removing the old ENTRY cmass Red maple
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 9.92150003 12.81213273]
removing the old ENTRY cmass Red maple
MTF_site 11.549146624599949
Yamasaki2006SnagHardwoods
Bartlett Experimental Forest
removing the old ENTRY
Bartlett Experimental Forest
#--------------------------------------#
#   Sinclair2004PersistenceAustralia   #
#--------------------------------------#

No. sites: 1
No. species: 2 
No. DBH classes: 1


Calculating MTFcount!


 Sugarwood
DBH class:   cm;  Sugarwood
Weigh to species level True
17.339063881301005
removing the old ENTRY count Sugarwood

 Myoporum platycarpum
DBH class:   cm;  Myoporum platycarpum
Weigh to species level True
32.635084780971646
removing the old ENTRY count Myoporum platycarpum
MTF_site 25.250798829406513
Sinclair2004PersistenceAustralia

removing the old ENTRY

#----------------------------------#
#   Chambers2005PonderosaArizona   #
#----------------------------------#

No. sites: 1
No. species: 1 
No. DBH classes: 3


Calculating MTFcount!


 Ponderosa pine
DBH class:  10-24.9 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  25-50.9 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  51-88 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
8.099835818880344
removing the old ENTRY count Ponderosa pine
MTF_site 8.099835818880344
Chambers2005PonderosaArizona
Coconino and Kaibab National Forests
removing the old ENTRY
Coconino and Kaibab National Forests
Calculating MTFcmass!


 Ponderosa pine
DBH class:  10-24.9 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  25-50.9 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  51-88 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 7.36127048  8.62516253 10.01358814]
removing the old ENTRY cmass Ponderosa pine
MTF_site 8.678743327201788
Chambers2005PonderosaArizona
Coconino and Kaibab National Forests
removing the old ENTRY
Coconino and Kaibab National Forests
#----------------------------------#
#   Mäkinen2006PredictingFinland   #
#----------------------------------#

No. sites: 3
No. species: 3 
No. DBH classes: 1


Calculating MTFcount!


 Scots pine
DBH class:   cm;  Scots pine
removing the old ENTRY count Scots pine
Weigh to species level True
21.55636501551964
removing the old ENTRY count Scots pine
MTF_site 21.55636501551964
Mäkinen2006PredictingFinland
Scots pine plantation
removing the old ENTRY
Scots pine plantation
 Norway spruce
DBH class:   cm;  Norway spruce
removing the old ENTRY count Norway spruce
Weigh to species level True
24.843247617935088
removing the old ENTRY count Norway spruce
MTF_site 24.843247617935088
Mäkinen2006PredictingFinland
Norway spruce plantation
removing the old ENTRY
Norway spruce plantation
 Silver birch
DBH class:   cm;  Silver birch
removing the old ENTRY count Silver birch
Weigh to species level True
16.349446833494934
removing the old ENTRY count Silver birch
MTF_site 16.349446833494934
Mäkinen2006PredictingFinland
Silver birch plantation
removing the old ENTRY
Silver birch plantation
#------------------------------------#
#   Ritchie2014EstablishmentForest   #
#------------------------------------#

No. sites: 1
No. species: 3 
No. DBH classes: 4


Calculating MTFcount!


 Ponderosa pine
DBH class:  2-15 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  15-30 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  30-45 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
DBH class:  >45 cm;  Ponderosa pine
removing the old ENTRY count Ponderosa pine
Weigh to species level True
3.013061934208048
removing the old ENTRY count Ponderosa pine

 White fir
DBH class:  2-15 cm;  White fir
removing the old ENTRY count White fir
DBH class:  15-30 cm;  White fir
removing the old ENTRY count White fir
DBH class:  30-45 cm;  White fir
removing the old ENTRY count White fir
DBH class:  >45 cm;  White fir
removing the old ENTRY count White fir
Weigh to species level True
6.385737560290609
removing the old ENTRY count White fir

 Incense cedar
DBH class:  2-15 cm;  Incense cedar
removing the old ENTRY count Incense cedar
DBH class:  15-30 cm;  Incense cedar
removing the old ENTRY count Incense cedar
DBH class:  30-45 cm;  Incense cedar
removing the old ENTRY count Incense cedar
DBH class:  >45 cm;  Incense cedar
removing the old ENTRY count Incense cedar
Weigh to species level True
43.377734024674126
removing the old ENTRY count Incense cedar
MTF_site 9.875250733173539
Ritchie2014EstablishmentForest
Blacks Mountain Experimental Forest - Cone Fire
removing the old ENTRY
Blacks Mountain Experimental Forest - Cone Fire
Calculating MTFcmass!


 Ponderosa pine
DBH class:  2-15 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  15-30 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  30-45 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
DBH class:  >45 cm;  Ponderosa pine
removing the old ENTRY cmass Ponderosa pine
Weigh to species level False
Cmass whole multiple MTF_species_dc [2.74900183 3.413157   4.1607625  6.89017087]
removing the old ENTRY cmass Ponderosa pine

 White fir
DBH class:  2-15 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  15-30 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  30-45 cm;  White fir
removing the old ENTRY cmass White fir
DBH class:  >45 cm;  White fir
removing the old ENTRY cmass White fir
Weigh to species level False
Cmass whole multiple MTF_species_dc [ 5.39642386  5.93842026 10.99905465 62.6891268 ]
removing the old ENTRY cmass White fir

 Incense cedar
DBH class:  2-15 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
DBH class:  15-30 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
DBH class:  30-45 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
DBH class:  >45 cm;  Incense cedar
removing the old ENTRY cmass Incense cedar
Weigh to species level False
Cmass whole multiple MTF_species_dc [42.7317334  45.24494131 42.7317334  42.7317334 ]
removing the old ENTRY cmass Incense cedar
MTF_site 30.39354066548366
Ritchie2014EstablishmentForest
Blacks Mountain Experimental Forest - Cone Fire
removing the old ENTRY
Blacks Mountain Experimental Forest - Cone Fire